研究领域

开发单拷贝核基因标记；建立跨物种靶基因富集方法；创新位点筛选的分子系统学分析方法

；海洋鱼类的分类和生物地理

论文与著作

[1] H Li, Y. He, J. Jiang, Z.Liu, C. Li, 2018. Molecular systematics and phylogenetic analysis of the Asianendemic freshwater sleepers (Gobiiformes: Odontobutidae).Mol. Phylogenet.Evol., 121, 1-11 .

[2] Liu J,Jiang J, Song S,Tornabene, L., Chabarria, R., Naylor, G. J. P., Li, C, 2017.Multilocus DNAbarcoding - Species Identification with Multilocus Data. Sci.Rep. 7, 16601.

[3] Song, S.,Zhao, J., Li, C.,2017. Species delimitation and phylogenetic reconstruction of the sinipercids(Perciformes: Sinipercidae) based on target enrichment of thousands of nuclearcoding sequences. Mol. Phylogenet. Evol. 111, 44 -55.

[4] Corrigan, S., MaisanoDelser, P., Eddy, C., Duffy, C., Yang, L., Li, C., Bazinet, AL,Mona, S.,Naylor, GJ, 2017. Historical introgression drives pervasive mitochondrialadmixture between two species of pelagic sharks. Mol. Phylogenet. Evol. 110,122-126.

[5] Wang, Q.,Zhang, J.,Matsumoto, H., Kim, J., Li, C. 2016. Population structure of elongate ilishaIlisha elongata along the Northwestern Pacific Coast by mitochondrial controlregion sequences. Fish Sci, 82 5): 771 - 785.

[6] PM Delser, Corrigan S.,Hale M., Li C., Veuille M., Planes S., Naylor G., Mona S.2016. Populationgenomics of  C. melanopterus using target gene capture data: demographicinferences and conservation perspectives. Sci Rep. (6): 33753. doi:10.1038 /srep33753.

[7] Yuan H,Jiang J, JimenezFA, Hoberg EP, Cook JA, Galbreath KE, Li C. 2016. Target gene enrichment in thecyclophyllidean cestodes, the most diverse group of tapeworms. Mol Ecol Resour.2016 Apr 1. doi : 10.1111 / 1755-0998.12532. [Epubahead of print].

[8] Nicolas Straube, ChenhongLi, Julien M. Claes, Shannon Corrigan and Gavin JP Naylor,2015. Molecularphylogeny of Squaliformes and first occurrence of bioluminescence in sharks. BMC:Evolutionary Biology, 15: 162. DOI 10.1186 /s12862-015-0446- 6.

[9] Chenhong Li, ShannonCorrigan, Lei Yang, Nicolas Straube, Mark Harris, MichaelHofreiter, William T.White, Gavin Naylor, 2015. DNA Capture Reveals Trans Oceanic Gene Flow inEndangered River Sharks. Proceedings of the National Academy of Sciences of theUnited States of America, www.pnas.org/cgi/doi/10.1073/pnas.1508735112.

[10] Nicolas Straube, WilliamT. White, Hsuan-Ching Ho, Elisabeth Rochel, Shannon Corrigan,Chenhong Li, GavinJP Naylor, 2014. A DNA sequence-based identification checklist for Taiwanesechondrichthyans. Zootaxa (Impact Factor: 0.97) / 2013;3752 (1): 256.

[11] H Ma, CMa, C Li, J Lu, XZou, Y Gong, W Wang, W Chen, L Ma, L Xia. 2015. First mitochondrial genome forthe red crab (Charybdis feriata) with implication of phylogenomics andpopulation genetics Scientific Reports, (5), 11524.

[12] Nicolas Straube, Robin W.Leslie, Paul J. Clerkin, David A. Ebert, Elisabeth Rochel,Shannon Corrigan,Chenhong Li, Gavin JP Naylor, 2014. On the occurrence of the southernLanternshark, Etmopterus granulosus, off south Africa, with comments on thevalidity of E. compagnoi. Deep Sea Research Part II Topical StudiesinOceanography. DOI: 10.1016 / j.dsr2.2014.04.004

[13] X. Yao,C. Li, CW Dick,2013. Exon-primed intron-crossing (EPIC) markers for evolutionary studies ofFicus and other taxa in the fig family (Moraceae).Applications in PlantSciences 1 (10) 1300037.

[14] P. R.Ströher, C. Li andM.R. Pie, 2013. Exon-primed intron-crossing (EPIC) makers as a tool for antPhylogeography, Revista Brasileira de Entomologia, AHEAD.

[15] Li, C.,M., Hofreiter, N.,Straube, S., Corrigan, G. J. P. Naylor, 2013. Capturing protein-coding genesacross highly divergent species. BioTechniques 54:321-326.

[16]Betancur-R. R, BroughtonRE, Wiley EO, Carpenter K, López JA, Li C, Holcroft NI, Arcila D,Sanciangco M,Cureton II JC, Zhang F, Buser T, Campbell MA, Ballesteros JA, Roa- Varon A,Willis S,Borden WC, Rowley T, Reneau PC, Hough DJ, Lu G, Grande T, Arratia G,Ortí G., 2013. The Tree of Life and a New Classification of Bony Fishes. PLOSCurrents Tree of Life 2013 Apr 18.

[17]Broughton RE, Betancur-R.R, Li C, Arratia G, Ortí G. Multi-locus phylogenetic analysis reveals thepattern and tempo of bony fish evolution. PLOS Currents Tree of Life. 2013 Apr16.

[18]Betancur-R., R., C. Li, T.A Munroe, JA Ballesteros, G. Ortí. 2013. Addressing gene tree discordance andnon-stationarity to resolve a multi-locus phylogeny of theflatfishes(Teleostei: Pleuronectiformes Systematic Biology 62 (5): 763-785.

[19] Li, C., Riethoven, J.-JM, Naylor, G. 2012. EvolMarkers: a database for mining exon andintron markersfor evolution, ecology and conservation studies. Molecular Ecology Resources,12 (5): 967-71 .

[20] Li, C.,Matthes, K.,Garcia, M., Naylor, G. J. P. 2012. Nuclear markers for phylogenetics ofchrichrichthyes and the problem in rooting phylogeny with distant outgroup.Molecular Phylogenetics and Evolution, 63: 365-373.

[21] Low genetic diversity inNurseryfish, Kurtus gulliveri (Perciformes: Kurtidae), and an appraisal of itsbreeding system using microsatellite loci. The Beagle, Records of the Museumsand Art Galleries of the Northern Territory, 2011 27:179-188.

[22] Li, C.,Betancur-R, R.,Smith, Wm. L., Ortí, G. 2011. Monophyly and interrelationships of Snook andBarramundi (Centropomidae sensu Greenwood) and five new markers forfish phylogenetics. Molecular Phylogenetics and Evolution, 60: 463-471.

[23] Li, C.,Ortí, G., Zhao,J.,2010. The phylogenetic placement of sinipercid fishes (Perciformes)wasrevealed by 11 nuclear loci. Molecular Phylogenetics and Evolution,56:1096-1104.

[24] Li, C., Riethoven,J.-J.M., Ma, L., 2010. Exon-primed intron-crossing (EPIC) markers for non-modelteleost fishes. BMC: Evolutionary Biology, 10: 90.

荣誉与奖励